Journal Publications

[41]Zhuohua Zhang, Fangxiang Wu, Qi Li, Ruiqing Zheng, Min Li.Prioritizing Disease Genes By Using Search Engine Algorithm. Current Bioinformatics
[42]Fangxiang Wu., Zhen Zhang, Haihua Gu, Min Li*, Xiaojun Ding.Detecting SNP combinations discriminating human populations from HapMap data. IEEE Transactions on Nanobioscience, DOI (identifier) 10.1109/TNB.2015.2391134, 2015
[43]Yi Pan, Jianxin Wang, Min Li*, Wooyoung Kim.Detection of Essential Proteins in a PPI Network with Network Motif and Gene Ontology. Int. J. DataMing and Bioinformatics
[44]Fangxiang Wu, Min Li, Jianxin Wang, Jun Ren.Discovering essential proteins based on PPI network and protein complex. Int. J. DataMing and Bioinformatics
[45]Qilong Feng*, Weiping Wang, Min Li, Gamage Upeksha Ganegoda.Heterogeneous Network Model to Infer Human Disease-Long Non Coding RNA Associations. IEEE Transactions on Nanobioscience, DOI (identifier) 10.1109/TNB.2015.2391133,2015
[46]Fang-Xiang Wu, Min Li, Yichao Shen, Lin Wu.Network Output Controllability-Based Method for Drug Target Identification. IEEE Transactions on Nanobioscience. DOI (identifier) 10.1109/TNB.2015.2391175, 2015
[47]Yi Pan, Min Li, Qianghua Xiao, Zhen Zhang, Jianxing Wang, Xiaoqing Peng.Re-alignment of the unmapped reads with base quality score. BMC Bioinformatics, 2015, 16(Suppl 5):S8
[48]Jianxin Wang, Xuehong Wu, Min Li*, Weijie Chen.Identifying protein complexes based on the integration of PPI network and gene expression data. Int. J. Bioinformatics Research and Applications, 2015, Vol. 11, No. 1, pp.30–44
[49]Yi Pan, Jianxin Wang, Hanhui Zhang, Ruiqing Zheng, Min Li.Effective identification of essential proteins based on priori knowledge, network topology and gene expressions. Methods,2014,67(3):325-333
[50]Yi Pan, Fang-Xiang Wu, Jianxin Wang, Yu Lu, Min Li.A topology potential-based method for identifying essential proteins from PPI networks. IEEE/ACM Transactions on Computational Biology and Bioinformatics. DOI 10.1109/TCBB.2014.2361350, 2014
[51]Yi Pan, Fang-Xiang Wu, Jianxin Wang, Weijie Chen, Min Li.Identifying dynamic protein complexes based on gene expression profiles and PPI Networks. BioMed Research International. Volume 2014 (2014), Article ID 375262, 10 pages
[52]Fang-Xiang Wu, Jianxin Wang, Qing Liu, Jiayi Zhang, Min Li.Prediction of disease-related genes based on weighted tissue-specific network by using DNA methylation. BMC Medical Genomics, 2014, 7(Suppl 2):S4
[53]Yi Pan, FangXiang Wu, Jianxin Wang, Gamage Upeksha Ganegoda, Qi Li, Min Li.Prioritization of orphan disease-causing genes using topological feature and GO similarity between proteins in interaction networks. SCIENCE CHINA Life Sciences. Sci China Life Sci, 2014, 57:1064–1071
[54]Wei Xu, Guoxing Fu, Jendai Richards, Xuehong Wu, Wenzhi Li, Li Ma, Min Li, Qiling Li.Tameka Bythwood, Xu Li, Jianxin Wang, Qing Song. A Method to Evaluate Genome-wide Methylation in Archival Formalin-fixed, Paraffin-embedded Ovarian Epithelial Cells. Plos ONE, 2014, 9(8): e104481
[55]Fang-Xiang Wu, Jianxin Wang, Min Li, Bolin Chen.Disease gene identification by using graph kernels and Markov random fields. Sci China Life Sci, 2014, 57(11): 1054-1063
[56]Yi Pan., Min Li, Fang-Xiang Wu, Zhen Zhang, Jianxin Wang, Junwei Luo.EPGA: de novo assembly using the distributions of reads and insert size. Bioinformatics, doi:10.1093/bioinformatics/btu762, 2014
[57]Yi Pan., Yiming He, Min Li, Jianxin Wang, Xiwei Tang.A Novel Algorithm for Detecting Protein Complexes with the Breadth First Search. BioMed Research International, Volume 2014 (2014), Article ID 354539, 8 pages
[58]Yi Pan, Fang-xiang Wu, Min Li, Jianxin Wang, Bihai Zhao.Detecting Protein Complex Based on Uncertain Graph Model. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2014, 11(3): 486-497
[59]Yi Pan, Fang-xiang Wu, Min Li, Jianxin Wang, Bihai Zhao.Prediction of essential proteins based on overlapping essential modules. IEEE Transactions on Nanobioscience, 2014,13(4):1-10
[60]FangXiang Wu, Min Li, JianXin Wang, Bolin Chen.Identifying disease genes by integrating multiple data sources, BMC Medical Genomics, 2014, 7(Suppl 2):S2

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